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Disk Utility Reporting errors

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Hi all,
i have a question which i don't understand. I have just got a new macbook for a few days and was repairing my disk permission and i have received the following errors;
2009-01-09 01:25:37 +0800: Disk Utility started.
2009-01-09 01:25:47 +0800: Repairing permissions for “Macintosh HD”
2009-01-09 01:25:47 +0800: Reading permissions database.
2009-01-09 01:25:47 +0800: Reading the permissions database can take several minutes.
2009-01-09 01:30:57 +0800: Warning: SUID file "System/Library/Filesystems/AppleShare/afpLoad" has been modified and will not be repaired.
2009-01-09 01:30:57 +0800: Warning: SUID file "System/Library/Filesystems/AppleShare/checkafp.app/Contents/MacOS/checkafp" has been modified and will not be repaired.
2009-01-09 01:30:58 +0800: Warning: SUID file "System/Library/PrivateFrameworks/DiskManagement.framework/Versions/A/Resources /DiskManagementTool" has been modified and will not be repaired.
2009-01-09 01:30:58 +0800: Warning: SUID file "System/Library/PrivateFrameworks/Install.framework/Versions/A/Resources/runner " has been modified and will not be repaired.
2009-01-09 01:30:58 +0800: Warning: SUID file "sbin/mount_nfs" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "sbin/umount" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "sbin/ping" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "sbin/ping6" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "sbin/route" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "usr/sbin/netstat" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "usr/sbin/traceroute" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "bin/rcp" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "System/Library/Extensions/webdavfs.kext/Contents/Resources/loadwebdav" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "System/Library/PrivateFrameworks/Admin.framework/Versions/A/Resources/readconf ig" has been modified and will not be repaired.
2009-01-09 01:30:59 +0800: Warning: SUID file "System/Library/PrivateFrameworks/Admin.framework/Versions/A/Resources/writecon fig" has been modified and will not be repaired.
2009-01-09 01:31:00 +0800: Warning: SUID file "usr/bin/setregion" has been modified and will not be repaired.
2009-01-09 01:31:00 +0800: Warning: SUID file "System/Library/CoreServices/Finder.app/Contents/Resources/OwnerGroupTool" has been modified and will not be repaired.
2009-01-09 01:31:01 +0800: Warning: SUID file "usr/libexec/ssh-keysign" has been modified and will not be repaired.
2009-01-09 01:31:02 +0800: Warning: SUID file "System/Library/Printers/IOMs/LPRIOM.plugin/Contents/MacOS/LPRIOMHelper" has been modified and will not be repaired.
2009-01-09 01:31:04 +0800: Warning: SUID file "Applications/System Preferences.app/Contents/Resources/installAssistant" has been modified and will not be repaired.
2009-01-09 01:31:07 +0800: Warning: SUID file "usr/bin/login" has been modified and will not be repaired.
2009-01-09 01:31:07 +0800: Warning: SUID file "usr/lib/sa/sadc" has been modified and will not be repaired.
2009-01-09 01:31:07 +0800: Warning: SUID file "usr/libexec/chkpasswd" has been modified and will not be repaired.
2009-01-09 01:31:08 +0800: Warning: SUID file "usr/bin/lppasswd" has been modified and will not be repaired.
2009-01-09 01:31:08 +0800: Warning: SUID file "usr/bin/quota" has been modified and will not be repaired.
2009-01-09 01:31:09 +0800: Warning: SUID file "usr/bin/ipcs" has been modified and will not be repaired.
2009-01-09 01:31:09 +0800: Warning: SUID file "usr/sbin/traceroute6" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/rlogin" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/rsh" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/at" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/atq" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/atrm" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/batch" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/chfn" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/chpass" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/chsh" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/newgrp" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/passwd" has been modified and will not be repaired.
2009-01-09 01:31:10 +0800: Warning: SUID file "usr/bin/top" has been modified and will not be repaired.
2009-01-09 01:31:11 +0800: Warning: SUID file "Applications/Utilities/Keychain Access.app/Contents/Resources/kcproxy" has been modified and will not be repaired.
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/appletviewe r", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/apt", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/extcheck", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/idlj", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jar", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jarsigner", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/java", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/javac", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/javadoc", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/javah", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/javap", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jconsole", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jdb", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jinfo", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jmap", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jps", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jsadebugd", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jstack", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jstat", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/jstatd", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/keytool", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/native2asci i", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/orbd", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/pack200", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/policytool" , should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/rmic", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/rmid", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/rmiregistry ", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:17 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/serialver", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/servertool" , should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/tnameserv", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Commands/unpack200", should be -rwxr-xr-x , they are lrwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/unpack200", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/tnameserv", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/servertool" , should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/serialver", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/rmiregistry ", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/rmid", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/rmic", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/policytool" , should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/pack200", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/orbd", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/native2asci i", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/keytool", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jstatd", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jstat", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jstack", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jsadebugd", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jps", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jmap", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jinfo", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jdb", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jconsole", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/javap", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/javah", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/javadoc", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/javac", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/java", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jarsigner", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/jar", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:18 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/idlj", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:19 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/extcheck", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:19 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/apt", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:19 +0800: Permissions differ on "System/Library/Frameworks/JavaVM.framework/Versions/1.5.0/Home/bin/appletviewe r", should be lrwxr-xr-x , they are -rwxr-xr-x .
2009-01-09 01:31:24 +0800: Group differs on "private/etc/cups", should be 0, group is 26.
2009-01-09 01:31:57 +0800:
2009-01-09 01:31:57 +0800: Permissions repair complete
2009-01-09 01:31:57 +0800:
2009-01-09 01:31:57 +0800:
Please advise what could be happening?
Thanks in advance

Answers

I must confess that that's a lot of warnings and messages.
If you re-run the permissions repair are they gone? Or are they still there?
I have found that using the manual combo update reduces the number of these warnings to just a few. I typically get the cups thing every so often and get a few SUID warnings but only two or three.
What you have, IMO, is an exceptionally large number of warnings.

Read other 5 answers

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